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Intron Name: Anas_platyrhynchos_platyrhynchos_9_24055608_24055705_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24055608 - 24055705

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

ATCTCGTTGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

TTTCCCTTATTA

Flanking Amino Acid:

AEIAYASIGEIDKVQYINSI

Intron Amino Acid Position:

643

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.4

26.8

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

69.4

0.44

1.1

64.5

40.9

Minor 5ss

29.7

-2.3

3.3

37.8

Minor BPS

71.4

0.67

1.5

80.93

34.7

Associated Gene:

Gene:

IFT80

Ensembl Gene ID:

ENSAPLG00000006299

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045057

24015419 - 24060044

44626

ENSAPLT00000006589

24015419 - 24060684

45266