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Intron Name: Anas_platyrhynchos_platyrhynchos_9_24055879_24056999_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24055879 - 24056999

Intron Length:

1121

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAATATTT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTATTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TTCTGTTTTATT

Flanking Amino Acid:

QVNINLYNWDRALELAVKHK

Intron Amino Acid Position:

700

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

83.5

28.8

Major BPS

79.2

0.73

75.3

39.4

Major PPT

85.9

0.81

0.8

78.1

40.1

Minor 5ss

43.9

-0.7

3.1

65.3

45.8

Minor BPS

52.2

0.15

2.1

75.01

42.5

Associated Gene:

Gene:

IFT80

Ensembl Gene ID:

ENSAPLG00000006299

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045057

24015419 - 24060044

44626

ENSAPLT00000006589

24015419 - 24060684

45266