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Intron Name: Anas_platyrhynchos_platyrhynchos_9_24057124_24059910_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24057124 - 24059910

Intron Length:

2787

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGT|GTAAGTATT

5'SS Class:

major

3'SS Sequence:

TCTTTTCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATTAT

U12 Branch Point Sequence:

ATTATTTGACCT

Flanking Amino Acid:

NKRFLQYAEGLEVDWNKIKA

Intron Amino Acid Position:

742

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

83.8

34.5

Major BPS

75.9

0.64

66.1

40.5

Major PPT

92.5

0.96

0.6

88.3

21.4

Minor 5ss

43.7

-0.7

2.9

61.3

Minor BPS

49.6

0.05

1.7

71.37

39.7

Associated Gene:

Gene:

IFT80

Ensembl Gene ID:

ENSAPLG00000006299

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045057

24015419 - 24060044

44626

ENSAPLT00000006589

24015419 - 24060684

45266