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Intron Name: Anas_platyrhynchos_platyrhynchos_9_24102294_24102413_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24102294 - 24102413

Intron Length:

120

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTAAGTGCG

5'SS Class:

major

3'SS Sequence:

ACTTTATTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

TAAACTTTATTT

Flanking Amino Acid:

NRKKSPVADLLPHMPHISEC

Intron Amino Acid Position:

172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

1.1

64.5

39.8

Major BPS

73.8

0.59

0.9

26.8

Major PPT

82.7

0.74

0.8

73.9

40.1

Minor 5ss

35.6

-1.6

3.2

47.6

42.2

Minor BPS

56.6

0.29

1.6

70.74

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006069

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024499

24100445 - 24233487

133043

ENSAPLT00000006297

24100445 - 24110781

10337