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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2410340_2417456_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2410340 - 2417456

Intron Length:

7117

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

TAAAATTCTATT

Flanking Amino Acid:

FIDQNQSPTKGNISIITLPV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.4

26.8

Major BPS

81.6

0.78

0.8

24.9

Major PPT

89.5

0.89

0.7

88.9

28.2

Minor 5ss

29.7

-2.3

3.3

37.8

Minor BPS

41.4

-0.6

1.9

56.09

40.1

Associated Gene:

Gene:

TFDP2

Ensembl Gene ID:

ENSAPLG00000005603

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030142

2404674 - 2439973

35300

ENSAPLT00000005801

2408920 - 2439973

31054