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Intron Name: Anas_platyrhynchos_platyrhynchos_9_24106243_24130767_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24106243 - 24130767

Intron Length:

24525

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGTGGG

5'SS Class:

major

3'SS Sequence:

CCTTCCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGACAC

U12 Branch Point Sequence:

CCCGCCTGACAC

Flanking Amino Acid:

ERGQRANPASAQKNERESIR

Intron Amino Acid Position:

304

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

63.5

42.9

Major BPS

48.1

-0.1

1.2

56.1

39.6

Major PPT

82.9

0.74

0.7

76.7

25.3

Minor 5ss

27.1

-2.6

31.9

42.5

Minor BPS

41.8

-0.6

1.8

43.51

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006069

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024499

24100445 - 24233487

133043