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Intron Name: Anas_platyrhynchos_platyrhynchos_9_24131374_24189069_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24131374 - 24189069

Intron Length:

57696

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TCTCCCCCGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

GCATCCCTGACG

Flanking Amino Acid:

MNTFSDSSTPDPREDGMDLG

Intron Amino Acid Position:

102

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

69.7

35.1

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

70.2

0.45

0.9

65.9

30.2

Minor 5ss

-2.4

3.1

36.8

40.4

Minor BPS

53.3

-0

1.8

57.18

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006069

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024499

24100445 - 24233487

133043