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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2417561_2421542_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2417561 - 2421542

Intron Length:

3982

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TCTAATTTCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TGTTGTTTAATT

Flanking Amino Acid:

PINVNVGPQMLISTSQRLTN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

89.6

24.1

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

77.3

0.61

0.9

68.8

41.5

Minor 5ss

46.3

-0.4

2.8

64.1

41.5

Minor BPS

68.9

0.67

1.7

84.22

37.1

Associated Gene:

Gene:

TFDP2

Ensembl Gene ID:

ENSAPLG00000005603

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030142

2404674 - 2439973

35300

ENSAPLT00000005801

2408920 - 2439973

31054