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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2423113_2424201_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2423113 - 2424201

Intron Length:

1089

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCCTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

TTCTCCTTACAG

Flanking Amino Acid:

REFIESDFSESKRSKKGDKN

Intron Amino Acid Position:

128

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.8

1.03

0.7

89.6

22.7

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

89.8

0.9

0.6

84.3

23.7

Minor 5ss

32.9

-1.9

2.7

43.2

43.8

Minor BPS

62.1

0.24

1.8

68.4

44.9

Associated Gene:

Gene:

TFDP2

Ensembl Gene ID:

ENSAPLG00000005603

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030142

2404674 - 2439973

35300

ENSAPLT00000005801

2408920 - 2439973

31054