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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2424365_2424916_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2424365 - 2424916

Intron Length:

552

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

GTTTCCTTAGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

GTTTCCTTAGCA

Flanking Amino Acid:

NSNSHLATDSAYDQKNIRRR

Intron Amino Acid Position:

183

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

31.9

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

78.5

0.64

0.9

74.4

Minor 5ss

32.5

-2

3.2

40.8

45.4

Minor BPS

77.5

0.86

1.5

84.6

35.1

Associated Gene:

Gene:

TFDP2

Ensembl Gene ID:

ENSAPLG00000005603

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030142

2404674 - 2439973

35300

ENSAPLT00000005801

2408920 - 2439973

31054