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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2426185_2427733_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2426185 - 2427733

Intron Length:

1549

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATATATT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GTTTTCTTAATT

Flanking Amino Acid:

RAQLQELLLQQIAFKNLVQR

Intron Amino Acid Position:

254

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

0.9

85.9

29.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

95.3

1.02

0.5

91.2

20.6

Minor 5ss

47.1

-0.3

2.7

68.3

42.6

Minor BPS

84.3

1.15

0.9

92.31

29.9

Associated Gene:

Gene:

TFDP2

Ensembl Gene ID:

ENSAPLG00000005603

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030142

2404674 - 2439973

35300

ENSAPLT00000005801

2408920 - 2439973

31054