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Intron Name: Anas_platyrhynchos_platyrhynchos_9_24274949_24275358_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24274949 - 24275358

Intron Length:

410

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

CCTGTTCCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCAAAT

U12 Branch Point Sequence:

TTACTTTCAAAT

Flanking Amino Acid:

PAALQTQVQADMKVNTAQFM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

66.2

39.6

Major BPS

77.3

0.68

81.5

Major PPT

75.1

0.57

0.8

69.6

31.2

Minor 5ss

30.5

-2.2

2.8

37.9

39.5

Minor BPS

52.7

0.16

1.6

71.71

38.8

Associated Gene:

Gene:

MFSD1

Ensembl Gene ID:

ENSAPLG00000005507

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005774

24265294 - 24293497

28204

ENSAPLT00000024665

24264219 - 24275890

11672