Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_24308356_24309026_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24308356 - 24309026

Intron Length:

671

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGCTCC

5'SS Class:

strong_major

3'SS Sequence:

TACCGCCTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCATTTTTATAT

Flanking Amino Acid:

TKPIIGSNIPDSFGIMEPAF

Intron Amino Acid Position:

160

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

68.5

37.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

74.2

0.54

0.9

69.5

36.4

Minor 5ss

54.3

0.15

2.3

68.6

42.5

Minor BPS

53.1

0.17

1.7

69.12

42.1

Associated Gene:

Gene:

RARRES1

Ensembl Gene ID:

ENSAPLG00000005432

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005613

24302438 - 24310725

8288