Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_24310058_24310150_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24310058 - 24310150

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAAG

5'SS Class:

strong_major

3'SS Sequence:

ATCTGTTCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

ATATTTTTAAAT

Flanking Amino Acid:

TILLHEMPTQEMILCHMRLI

Intron Amino Acid Position:

227

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.7

33.7

Major BPS

90.4

0.7

90.2

19.3

Major PPT

78.7

0.65

0.9

69.7

Minor 5ss

32.8

-2

2.9

39.4

46.1

Minor BPS

69.2

0.68

1.3

80.13

35.2

Associated Gene:

Gene:

RARRES1

Ensembl Gene ID:

ENSAPLG00000005432

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005613

24302438 - 24310725

8288