Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_24313791_24314252_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24313791 - 24314252

Intron Length:

462

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TCCAACCCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTTAA

U12 Branch Point Sequence:

TTAACTTTGACT

Flanking Amino Acid:

YATELRSCTEGKGEYTMEYS

Intron Amino Acid Position:

733

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.1

1.13

0.6

93.5

20.3

Major BPS

73.4

0.58

0.9

63.7

35.1

Major PPT

69.2

0.43

0.9

58.4

Minor 5ss

38.4

-1.3

2.8

52.3

44.3

Minor BPS

73.3

0.81

1.2

84.73

35.5

Associated Gene:

Gene:

GFM1

Ensembl Gene ID:

ENSAPLG00000005022

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005220

24310956 - 24335418

24463