Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_24314307_24315169_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24314307 - 24315169

Intron Length:

863

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTGCT

5'SS Class:

strong_major

3'SS Sequence:

GCTTGGATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAATAAT

U12 Branch Point Sequence:

TATGCTTGGATT

Flanking Amino Acid:

LEGYFTLYAEVPLNDMFGYA

Intron Amino Acid Position:

715

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.91

0.8

80.6

31.9

Major BPS

62.3

0.31

1.3

64.3

39.7

Major PPT

67.1

0.39

62.6

43.1

Minor 5ss

41.4

-1

3.1

45.7

Minor BPS

54.5

0.22

1.6

72.07

39.4

Associated Gene:

Gene:

GFM1

Ensembl Gene ID:

ENSAPLG00000005022

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005220

24310956 - 24335418

24463