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Intron Name: Anas_platyrhynchos_platyrhynchos_9_24318411_24318966_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24318411 - 24318966

Intron Length:

556

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

AACTCTGTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

AATACCTTAATT

Flanking Amino Acid:

EFVLEDIFEKDSTVNCTAEV

Intron Amino Acid Position:

120

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

77.7

33.3

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

64.2

0.32

58.2

41.2

Minor 5ss

40.1

-1.1

2.9

49.5

41.1

Minor BPS

77.7

0.95

1.2

84.84

35.1

Associated Gene:

Gene:

LXN

Ensembl Gene ID:

ENSAPLG00000005337

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005514

24317411 - 24322607

5197