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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2432219_2438840_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2432219 - 2438840

Intron Length:

6622

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTAG

5'SS Class:

strong_major

3'SS Sequence:

TGCTTTCTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAA

U12 Branch Point Sequence:

CTATAATGAATA

Flanking Amino Acid:

VPKALEGYITDMSAGFSWMN

Intron Amino Acid Position:

360

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.6

1.07

0.7

30.2

Major BPS

78.5

0.71

0.9

69.7

37.1

Major PPT

80.7

0.69

0.8

73.5

37.1

Minor 5ss

39.5

-1.2

2.8

48.7

47.5

Minor BPS

47.3

-0.2

1.9

59.62

39.8

Associated Gene:

Gene:

TFDP2

Ensembl Gene ID:

ENSAPLG00000005603

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030142

2404674 - 2439973

35300

ENSAPLT00000005801

2408920 - 2439973

31054