Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_24333776_24333991_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24333776 - 24333991

Intron Length:

216

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGGCA

5'SS Class:

major

3'SS Sequence:

TATTGTTATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATTG

Flanking Amino Acid:

DTNINIIDTPGHVDFTIEVE

Intron Amino Acid Position:

148

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

68.6

36.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

75.9

0.58

0.9

74.6

40.1

Minor 5ss

29.6

-2.3

3.4

39.3

Minor BPS

63.6

0.29

1.6

70.13

38.1

Associated Gene:

Gene:

GFM1

Ensembl Gene ID:

ENSAPLG00000005022

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005220

24310956 - 24335418

24463