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Intron Name: Anas_platyrhynchos_platyrhynchos_9_24358514_24360356_F

Intron Information:

Intron Rank:

145819

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

24358514 - 24360356

Intron Length:

1843

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTACATGCT

5'SS Class:

weak_major

3'SS Sequence:

TCTTTTCCTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTGAT

U12 Branch Point Sequence:

ATCTGATTAAGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.5

0.18

1.1

39.1

Major BPS

82.5

0.81

0.8

71.4

36.6

Major PPT

84.6

0.78

0.7

77.9

Minor 5ss

36.2

-1.6

3.6

55.1

43.6

Minor BPS

48.4

-0

2.3

71.16

45.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028580

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037433

24356346 - 24361715

5370