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Intron Name: Anas_platyrhynchos_platyrhynchos_9_24420827_24434742_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24420827 - 24434742

Intron Length:

13916

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTACAA

U12 Branch Point Sequence:

ATTTACAAATCC

Flanking Amino Acid:

GNIKAGLEHLTPAEQAKARL

Intron Amino Acid Position:

175

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

89.6

24.1

Major BPS

73.5

0.59

81.3

29.9

Major PPT

86.1

0.81

0.7

83.7

24.4

Minor 5ss

46.3

-0.4

2.8

64.1

41.5

Minor BPS

44.2

-0.4

2.2

62.89

42.2

Associated Gene:

Gene:

RSRC1

Ensembl Gene ID:

ENSAPLG00000004783

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004945

24363370 - 24499172

135803