Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_24495018_24499081_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

24495018 - 24499081

Intron Length:

4064

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGCAAT

5'SS Class:

major

3'SS Sequence:

TATTTTTACTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTATTTTTACTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

38.4

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

77.8

0.63

0.9

78.2

Minor 5ss

35.2

-1.7

40.3

45.6

Minor BPS

64.3

0.53

1.5

79.64

37.1

Associated Gene:

Gene:

RSRC1

Ensembl Gene ID:

ENSAPLG00000004783

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004945

24363370 - 24499172

135803