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Intron Name: Anas_platyrhynchos_platyrhynchos_9_24505029_24506927_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24505029 - 24506927

Intron Length:

1899

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCTCCG

5'SS Class:

major

3'SS Sequence:

CTTGTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCGTGAC

U12 Branch Point Sequence:

CGCGGCGTGACG

Flanking Amino Acid:

RLGLSEARVQVWFQNRRAKC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.4

0.46

1.3

57.2

47.5

Major BPS

46.4

-0.2

1.4

36.7

42.3

Major PPT

75.9

0.58

0.8

69.8

Minor 5ss

38.7

-1.3

3.1

50.7

45.7

Minor BPS

37.9

-1

2.4

38.23

45.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028948

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045370

24504173 - 24507747

3575

ENSAPLT00000024546

24504173 - 24507830

3658