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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2458983_2462322_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2458983 - 2462322

Intron Length:

3340

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGTATG

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTTTACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAA

U12 Branch Point Sequence:

TTTTCCCCATCT

Flanking Amino Acid:

YFPYYGKSLHAHYLQPLVAV

Intron Amino Acid Position:

217

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

79.9

34.9

Major BPS

76.9

0.67

0.8

77.7

26.1

Major PPT

75.5

0.57

0.9

70.3

40.1

Minor 5ss

36.3

-1.5

2.9

41.7

Minor BPS

56.5

0.28

2.1

85.43

40.6

Associated Gene:

Gene:

ATP1B3

Ensembl Gene ID:

ENSAPLG00000028873

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042755

2458812 - 2474917

16106