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Intron Name: Anas_platyrhynchos_platyrhynchos_9_24594297_24596055_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24594297 - 24596055

Intron Length:

1759

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

TCTGTCATTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAG

U12 Branch Point Sequence:

TTTCAGCTAATT

Flanking Amino Acid:

YKLKNQKMTKCSKNLKNFCV

Intron Amino Acid Position:

187

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

83.6

28.5

Major BPS

0.65

1.5

85.7

34.9

Major PPT

75.2

0.57

0.9

66.8

39.3

Minor 5ss

46.3

-0.4

3.2

40.4

Minor BPS

46.5

-0.1

2.4

75.36

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004823

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030545

24586659 - 24602405

15747

ENSAPLT00000028120

24586659 - 24600090

13432

ENSAPLT00000004976

24586659 - 24600090

13432