Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_24596994_24598232_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24596994 - 24598232

Intron Length:

1239

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACC|GTAAGTTTA

5'SS Class:

major

3'SS Sequence:

GAATTTGTGCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TATTTTATAATT

Flanking Amino Acid:

SIVCFLFAALPQIYVACQNG

Intron Amino Acid Position:

113

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

1.3

75.4

37.3

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

61.9

0.27

1.2

54.3

49.3

Minor 5ss

45.6

-0.5

2.8

62.8

Minor BPS

0.55

1.5

81.43

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004823

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028120

24586659 - 24600090

13432

ENSAPLT00000004976

24586659 - 24600090

13432