Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_24618741_24619959_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24618741 - 24619959

Intron Length:

1219

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTGAA

5'SS Class:

major

3'SS Sequence:

TTATTTGAACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TTTATTTGAACC

Flanking Amino Acid:

EQIRIISSSPDYQTNDNDQA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

1.1

34.7

Major BPS

83.9

0.84

73.9

41.3

Major PPT

69.2

0.43

1.1

63.6

46.1

Minor 5ss

34.9

-1.7

3.3

49.9

46.4

Minor BPS

65.3

0.46

1.4

75.56

34.4

Associated Gene:

Gene:

VEPH1

Ensembl Gene ID:

ENSAPLG00000004613

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038875

24618449 - 24682764

64316

ENSAPLT00000004732

24618449 - 24685985

67537