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Intron Name: Anas_platyrhynchos_platyrhynchos_9_24629575_24633100_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24629575 - 24633100

Intron Length:

3526

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTCCA

5'SS Class:

strong_major

3'SS Sequence:

TTTACTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

CTTTACTTACAT

Flanking Amino Acid:

KWAARHLLPAGCETAILFPM

Intron Amino Acid Position:

192

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.4

1.05

0.8

80.7

33.8

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

90.3

0.91

0.7

88.5

28.4

Minor 5ss

34.5

-1.8

2.8

42.4

44.3

Minor BPS

0.3

78.16

43.8

Associated Gene:

Gene:

PTX3

Ensembl Gene ID:

ENSAPLG00000004626

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042004

24628961 - 24634171

5211

ENSAPLT00000004748

24628961 - 24634171

5211