Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_24638810_24640614_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24638810 - 24640614

Intron Length:

1805

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAAACCG

5'SS Class:

major

3'SS Sequence:

TTATTTCAAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTATTTCAAAT

Flanking Amino Acid:

QVVARKKELGVLKECIPCLL

Intron Amino Acid Position:

233

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.9

0.45

1.1

53.3

43.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

69.9

0.45

67.6

37.9

Minor 5ss

31.2

-2.2

3.1

32.1

41.9

Minor BPS

57.4

0.31

1.6

77.93

38.2

Associated Gene:

Gene:

VEPH1

Ensembl Gene ID:

ENSAPLG00000004613

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038875

24618449 - 24682764

64316

ENSAPLT00000004732

24618449 - 24685985

67537