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Intron Name: Anas_platyrhynchos_platyrhynchos_9_24653059_24654053_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24653059 - 24654053

Intron Length:

995

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGTTC

5'SS Class:

strong_major

3'SS Sequence:

CCTTGCCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCAAA

U12 Branch Point Sequence:

TGTTCCAAAGCA

Flanking Amino Acid:

KEERKDMRFNRSKSLALHAV

Intron Amino Acid Position:

446

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.79

0.9

75.6

34.9

Major BPS

62.7

0.32

1.2

33.2

Major PPT

78.9

0.65

0.8

69.1

Minor 5ss

47.4

-0.3

3.1

66.9

44.7

Minor BPS

48.9

-0

2.2

69.37

42.6

Associated Gene:

Gene:

VEPH1

Ensembl Gene ID:

ENSAPLG00000004613

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038875

24618449 - 24682764

64316

ENSAPLT00000004732

24618449 - 24685985

67537