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Intron Name: Anas_platyrhynchos_platyrhynchos_9_24654449_24665332_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24654449 - 24665332

Intron Length:

10884

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGGC

5'SS Class:

strong_major

3'SS Sequence:

TATTTGTTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCCTAT

U12 Branch Point Sequence:

TTCTCTGTATTT

Flanking Amino Acid:

IPIPDQCVIEDTVRSCVAKL

Intron Amino Acid Position:

578

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.8

73.3

36.4

Major BPS

68.8

0.47

1.3

66.7

41.7

Major PPT

81.3

0.7

0.9

73.8

41.4

Minor 5ss

30.8

-2.2

3.3

41.8

Minor BPS

49.8

0.06

2.2

74.81

43.2

Associated Gene:

Gene:

VEPH1

Ensembl Gene ID:

ENSAPLG00000004613

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038875

24618449 - 24682764

64316

ENSAPLT00000004732

24618449 - 24685985

67537