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Intron Name: Anas_platyrhynchos_platyrhynchos_9_24728034_24730502_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24728034 - 24730502

Intron Length:

2469

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGAACA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

ATTTTGTAAAGC

Flanking Amino Acid:

IHNLSQVQEENTLLQETVRR

Intron Amino Acid Position:

528

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

74.4

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

89.1

0.88

0.7

84.2

30.7

Minor 5ss

32.4

-2

3.1

40.9

45.1

Minor BPS

45.3

-0.3

2.5

63.52

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010703

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018256

24727626 - 24777921

50296

ENSAPLT00000036921

24727626 - 24777921

50296

ENSAPLT00000011161

24727626 - 24762883

35258

ENSAPLT00000029872

24727626 - 24778373

50748

ENSAPLT00000027332

24727626 - 24753026

25401

ENSAPLT00000021103

24727626 - 24778373

50748

ENSAPLT00000044078

24727626 - 24778373

50748