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Intron Name: Anas_platyrhynchos_platyrhynchos_9_24739410_24752625_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

24739410 - 24752625

Intron Length:

13216

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

GTTTCCATTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

ATGACCTGAATG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

77.8

33.2

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

80.9

0.7

0.9

74.4

Minor 5ss

41.3

-1

2.8

49.5

41.2

Minor BPS

57.3

0.09

1.6

59.67

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010703

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027332

24727626 - 24753026

25401