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Intron Name: Anas_platyrhynchos_platyrhynchos_9_24752751_24752864_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

24752751 - 24752864

Intron Length:

114

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGTGT

5'SS Class:

major

3'SS Sequence:

GCGTGCATCCTAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CACTAAT

U12 Branch Point Sequence:

TTGTGTGTATCG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.71

72.3

39.7

Major BPS

74.4

0.61

0.9

73.6

28.6

Major PPT

57.5

0.17

47.4

40.4

Minor 5ss

38.5

-1.3

3.4

56.5

47.6

Minor BPS

42.1

-0.7

2.5

54.17

47.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010703

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027332

24727626 - 24753026

25401