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Intron Name: Anas_platyrhynchos_platyrhynchos_9_24770640_24774651_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24770640 - 24774651

Intron Length:

4012

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGAGGCA

5'SS Class:

major

3'SS Sequence:

TATCTCTTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

TGTTTCTCACAT

Flanking Amino Acid:

MHSDNQMSREETVCKY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.9

0.47

1.1

39.1

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

81.3

0.7

0.8

73.9

36.4

Minor 5ss

27.5

-2.6

3.7

38.3

46.9

Minor BPS

50.7

0.1

1.9

74.04

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010703

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044078

24727626 - 24778373

50748

ENSAPLT00000018256

24727626 - 24777921

50296