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Intron Name: Anas_platyrhynchos_platyrhynchos_9_24818109_24825582_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

24818109 - 24825582

Intron Length:

7474

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTACC

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTGCCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATTAAC

U12 Branch Point Sequence:

GAGAGATTAACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

75.3

34.6

Major BPS

64.1

0.35

1.2

67.6

36.5

Major PPT

72.8

0.51

0.8

65.7

Minor 5ss

-2.1

2.6

39.1

38.9

Minor BPS

47.7

-0.1

2.1

64.26

45.2

Associated Gene:

Gene:

TIPARP

Ensembl Gene ID:

ENSAPLG00000010788

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011247

24798771 - 24825750

26980