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Intron Name: Anas_platyrhynchos_platyrhynchos_9_24827271_24828235_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

24827271 - 24828235

Intron Length:

965

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACCTTT

5'SS Class:

weak_major

3'SS Sequence:

TACCTGTTCATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTAAT

U12 Branch Point Sequence:

ATGGCTTTACCT

Flanking Amino Acid:

RKMSRKEKDERILWKKNEVA

Intron Amino Acid Position:

122

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

1.1

78.8

38.3

Major BPS

74.6

0.61

1.1

75.5

35.1

Major PPT

69.9

0.45

0.9

64.2

36.4

Minor 5ss

68.6

0.63

2.3

82.3

37.5

Minor BPS

58.1

0.33

1.7

73.52

43.9

Associated Gene:

Gene:

SSR3

Ensembl Gene ID:

ENSAPLG00000010825

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040894

24826040 - 24828467

2428

ENSAPLT00000011278

24826040 - 24829082

3043