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Intron Name: Anas_platyrhynchos_platyrhynchos_9_24828368_24829015_F

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

24828368 - 24829015

Intron Length:

648

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGT|GTATCCTTT

5'SS Class:

strong_minor

3'SS Sequence:

CTTCTTCCTACAG|A

3'SS Class:

strong_BPS

U2 Branch Point Sequence:

CTTTAAA

U12 Branch Point Sequence:

ACATCCTTAACC

Flanking Amino Acid:

FFVLKNFNPTVNYILSISAS

Intron Amino Acid Position:

166

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

49.6

-0

1.3

55.3

44.3

Major BPS

0.7

0.9

79.6

29.1

Major PPT

85.9

0.81

0.7

80.2

25.3

Minor 5ss

96.7

1.57

0.7

90.9

28.7

Minor BPS

80.3

0.93

1.1

77.87

37.6

Associated Gene:

Gene:

SSR3

Ensembl Gene ID:

ENSAPLG00000010825

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011278

24826040 - 24829082

3043