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Intron Name: Anas_platyrhynchos_platyrhynchos_9_24835243_24838729_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

24835243 - 24838729

Intron Length:

3487

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTTTTTTTTCCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

1.1

68.2

42.9

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

93.3

0.97

0.6

89.3

19.4

Minor 5ss

28.4

-2.5

2.9

32.7

Minor BPS

45.5

-0.2

3.6

82.93

38.6

Associated Gene:

Gene:

KCNAB1

Ensembl Gene ID:

ENSAPLG00000011083

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024791

24832668 - 24841196

8529