Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_24881025_24882666_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24881025 - 24882666

Intron Length:

1642

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGTATT

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTTTTGAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTTTTTTGAAG

Flanking Amino Acid:

FEAHNILRESGYAGKISQMP

Intron Amino Acid Position:

394

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

83.5

Major BPS

90.4

0.7

90.2

19.3

Major PPT

81.4

0.71

83.4

31.2

Minor 5ss

40.4

-1.1

3.2

56.3

42.5

Minor BPS

64.4

0.31

1.5

70.73

36.5

Associated Gene:

Gene:

GMPS

Ensembl Gene ID:

ENSAPLG00000011347

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011807

24879495 - 24892646

13152