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Intron Name: Anas_platyrhynchos_platyrhynchos_9_24907078_24907721_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24907078 - 24907721

Intron Length:

644

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

ACTTCCATTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TTTTGTTTAACT

Flanking Amino Acid:

TFCLLILTAKVGFSAADAVT

Intron Amino Acid Position:

357

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

33.6

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

77.5

0.62

0.9

70.6

34.1

Minor 5ss

40.4

-1.1

2.9

48.9

41.5

Minor BPS

78.9

0.98

1.6

95.57

31.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018174

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017826

24902644 - 24912786

10143