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Intron Name: Anas_platyrhynchos_platyrhynchos_9_24918695_24919372_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

24918695 - 24919372

Intron Length:

678

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAA|GCCCAAATC

5'SS Class:

weak_major

3'SS Sequence:

TTTCCATCAATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TATATTTTAAAC

Flanking Amino Acid:

GVFILKYPPKTTKFTNAVDI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.4

0.03

1.2

61.2

39.7

Major BPS

90.4

0.7

90.2

19.3

Major PPT

71.2

0.48

0.9

67.3

32.8

Minor 5ss

23.1

-3.1

34.7

35.1

Minor BPS

62.6

0.37

1.4

69.24

35.6

Associated Gene:

Gene:

C3orf33

Ensembl Gene ID:

ENSAPLG00000015160

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015793

24918653 - 24922653

4001