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Intron Name: Anas_platyrhynchos_platyrhynchos_9_24919527_24920432_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24919527 - 24920432

Intron Length:

906

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TATCTATATCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TTCTCTTTATCT

Flanking Amino Acid:

IPIVTSIQRKWQSKGLLLVR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

85.3

25.4

Major BPS

83.9

0.84

73.9

41.3

Major PPT

75.4

0.57

42.9

Minor 5ss

37.5

-1.4

2.8

46.9

41.8

Minor BPS

73.4

0.81

1.5

87.39

38.7

Associated Gene:

Gene:

C3orf33

Ensembl Gene ID:

ENSAPLG00000015160

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015793

24918653 - 24922653

4001

ENSAPLT00000045425

24919267 - 24921799

2533