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Intron Name: Anas_platyrhynchos_platyrhynchos_9_24919899_24920444_F

Intron Information:

Intron Rank:

Intron Class:

major_hybrid

Intron Phase:

Intron Coordinates:

24919899 - 24920444

Intron Length:

546

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCAGTTAAT

5'SS Class:

major

3'SS Sequence:

GGGCAATCCAAAG|G

3'SS Class:

major_hybrid

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TTCTCTTTATCT

Flanking Amino Acid:

TIPIQKPKHRGLLLVRLAGV

Intron Amino Acid Position:

110

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.71

1.1

75.6

40.3

Major BPS

83.9

0.84

73.9

41.3

Major PPT

47.8

-0.1

1.1

41.1

37.4

Minor 5ss

25.7

-2.8

3.9

41.6

Minor BPS

73.4

0.81

1.5

87.39

38.7

Associated Gene:

Gene:

C3orf33

Ensembl Gene ID:

ENSAPLG00000015160

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038884

24918589 - 24921253

2665