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Intron Name: Anas_platyrhynchos_platyrhynchos_9_24921176_24924333_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

24921176 - 24924333

Intron Length:

3158

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTTAGAGAC

5'SS Class:

weak_major

3'SS Sequence:

TAATTTTTTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTATAATT

Flanking Amino Acid:

IWQEESFSERASSGREAGPG

Intron Amino Acid Position:

186

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.7

0.21

1.2

55.3

36.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

74.3

0.55

1.1

75.7

37.9

Minor 5ss

28.4

-2.5

3.1

31.1

36.1

Minor BPS

70.1

0.71

1.5

88.07

30.7

Associated Gene:

Gene:

C3orf33

Ensembl Gene ID:

ENSAPLG00000015160

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017742

24918922 - 24924471

5550