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Intron Name: Anas_platyrhynchos_platyrhynchos_9_24951931_24954378_F

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

24951931 - 24954378

Intron Length:

2448

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTATCCTTT

5'SS Class:

strong_minor

3'SS Sequence:

GACGTGTTTGCAG|C

3'SS Class:

strong_BPS

U2 Branch Point Sequence:

CCTTGAC

U12 Branch Point Sequence:

GTTTCCTTGACG

Flanking Amino Acid:

SLAKRQRTHDHWVKQTFEEA

Intron Amino Acid Position:

157

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.2

0.03

1.2

56.4

43.4

Major BPS

61.6

0.29

1.1

54.6

40.8

Major PPT

69.2

0.43

61.1

44.3

Minor 5ss

97.5

1.6

0.6

95.7

13.5

Minor BPS

81.3

0.84

1.2

79.87

Associated Gene:

Gene:

PLCH1

Ensembl Gene ID:

ENSAPLG00000014302

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045762

24941526 - 24986495

44970

ENSAPLT00000024689

24932206 - 24986495

54290

ENSAPLT00000018105

24932206 - 24987660

55455

ENSAPLT00000014957

24924334 - 24986495

62162