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Intron Name: Anas_platyrhynchos_platyrhynchos_9_24964727_24965894_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24964727 - 24965894

Intron Length:

1168

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAAGTGTA

5'SS Class:

major

3'SS Sequence:

TTTTTGTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTATGAC

U12 Branch Point Sequence:

GCTGCTATGACT

Flanking Amino Acid:

TINKYAFVKNEFPVILSIEN

Intron Amino Acid Position:

397

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

75.2

35.1

Major BPS

62.4

0.31

1.1

55.1

40.4

Major PPT

88.5

0.87

0.7

84.9

29.9

Minor 5ss

37.5

-1.4

3.3

45.6

43.6

Minor BPS

50.5

0.1

1.7

68.41

42.8

Associated Gene:

Gene:

PLCH1

Ensembl Gene ID:

ENSAPLG00000014302

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014957

24924334 - 24986495

62162

ENSAPLT00000045762

24941526 - 24986495

44970

ENSAPLT00000024689

24932206 - 24986495

54290

ENSAPLT00000018105

24932206 - 24987660

55455