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Intron Name: Anas_platyrhynchos_platyrhynchos_9_24979703_24980546_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24979703 - 24980546

Intron Length:

844

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTGCCTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGAAAA

U12 Branch Point Sequence:

GTTAGCCAAACA

Flanking Amino Acid:

HITINEIYGKWSPLILNPSY

Intron Amino Acid Position:

826

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

76.2

39.9

Major BPS

0.2

1.2

65.3

38.6

Major PPT

88.2

0.86

0.7

85.4

29.3

Minor 5ss

34.9

-1.7

3.5

48.2

47.9

Minor BPS

44.2

-0.4

2.3

61.68

Associated Gene:

Gene:

PLCH1

Ensembl Gene ID:

ENSAPLG00000014302

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045762

24941526 - 24986495

44970

ENSAPLT00000024689

24932206 - 24986495

54290