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Intron Name: Anas_platyrhynchos_platyrhynchos_9_24979703_24981082_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24979703 - 24981082

Intron Length:

1380

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGTG

5'SS Class:

strong_major

3'SS Sequence:

CTTGTCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTCAC

U12 Branch Point Sequence:

CTGAACTCACTT

Flanking Amino Acid:

HITINEIYGKNKQLIGLRGL

Intron Amino Acid Position:

875

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

76.2

39.9

Major BPS

68.4

0.46

0.9

69.3

26.9

Major PPT

86.9

0.83

0.7

84.4

30.5

Minor 5ss

34.9

-1.7

3.5

48.2

47.9

Minor BPS

43.1

-0.4

1.9

57.6

45.3

Associated Gene:

Gene:

PLCH1

Ensembl Gene ID:

ENSAPLG00000014302

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018105

24932206 - 24987660

55455

ENSAPLT00000014957

24924334 - 24986495

62162