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Intron Name: Anas_platyrhynchos_platyrhynchos_9_24980607_24981082_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24980607 - 24981082

Intron Length:

476

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGACTTC

5'SS Class:

major

3'SS Sequence:

CTTGTCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTCAC

U12 Branch Point Sequence:

CTGAACTCACTT

Flanking Amino Acid:

TILHFLGATKNKQLIGLRGL

Intron Amino Acid Position:

846

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.1

66.5

40.4

Major BPS

68.4

0.46

0.9

69.3

26.9

Major PPT

86.9

0.83

0.7

84.4

30.5

Minor 5ss

46.4

-0.4

3.3

66.9

44.7

Minor BPS

43.1

-0.4

1.9

57.6

45.3

Associated Gene:

Gene:

PLCH1

Ensembl Gene ID:

ENSAPLG00000014302

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024689

24932206 - 24986495

54290

ENSAPLT00000045762

24941526 - 24986495

44970